Reliability hardening mechanisms in cyber-physical digital-microfluidic biochips

Guan Ruei Lu, Ansuman Banerjee, Bhargab B. Bhattacharya, Tsung Yi Ho, Hung-Ming Chen

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

In the area of biomedical engineering, digital-microfluidic biochips (DMFBs) have received considerable attention because of their capability of providing an efficient and reliable platform for conducting point-of-care clinical diagnostics. System reliability, in turn, mandates error-recoverability while implementing biochemical assays on-chip for medical applications. Unfortunately, the technology of DMFBs is not yet fully equipped to handle error-recovery from various microfluidic operations involving droplet motion and reaction. Recently, a number of cyber-physical systems have been proposed to provide real-time checking and error-recovery in assays based on the feedback received from a few on-chip checkpoints. However, to synthesize robust feedback systems for different types of DMFBs, certain practical issues need to be considered such as co-optimization of checkpoint placement, error-recoverability, and layout of droplet-routing pathways. For application-specific DMFBs, we propose here an algorithm that minimizes the number of checkpoints and determines their locations to cover every path in a given droplet-routing solution. Next, for general-purpose DMFBs, where the checkpoints are pre-deployed in specific locations, we present a checkpoint-aware routing algorithm such that every droplet-routing path passes through at least one checkpoint to enable error-recovery and to ensure physical routability of all droplets. Furthermore, we also propose strategies for executing the algorithms in reliable mode to enhance error-recoverability. The proposed methods thus provide reliability-hardening mechanisms for a wide class of cyber-physical DMFBs.

Original languageEnglish
Article number35
JournalACM Journal on Emerging Technologies in Computing Systems
Volume14
Issue number3
DOIs
StatePublished - 1 Oct 2018

Keywords

  • Biochips
  • Checkpoint
  • Droplet routing
  • Microfluidics
  • Physical design automation
  • Sensor

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